A: What does the term low pass mean? - http://www.biostars.org/p...
Sep 23, 2013
from
That doesn't really make sense. "Low-pass" generally refers to a genome that's sequenced to a depth under 10x. With this data, you can call germline SNPs, find structural variants, etc. It's not particularly useful for cancer sequencing though, as somatic variants are difficult to discern and forget about finding subclonal variants.
- Chris Miller